Algorithms in Bioinformatics
(dt. Algorithmische Bioinformatik)
|Level, degree of commitment in original study programme||Advanced module, compulsory elective module|
|Forms of teaching and learning,
|Lecture (2 SWS), recitation class (2 SWS), |
180 hours (60 h attendance, 120 h private study)
Course requirement: Successful completion of at least 50 percent of the points from the weekly exercises as well as at least 2 presentations of the tasks.
Examination type: Written or oral examination
|German,The grading is done with 0 to 15 points according to the examination regulations for study course M.Sc. Computer Sciences.|
|Original study programme||M.Sc. Informatik / Vertiefungsbereich Informatik|
|One semester, |
Regelmäßig alle 2 Semester
|Person in charge of the module's outline||Prof. Dr. Alfred Ultsch|
- Biological basics
- DNA analysis and gene detection
- Microarray techniques and analysis
- Visualization and dimension reduction
- Genes Ontologies
- overrepresentation analysis
- Micro-RNAs and their functions
- Knowledge discovery in biological knowledge bases
The students shall
- understand basic questions and goals in bioinformatics,
- know the basic concepts of DNA and protein modelling,
- acquire knowledge of the algorithmic basics of bioinformatic applications,
- understand and apply methods of knowledge discovery in biological databases,
- practice scientific working methods (recognizing, formulating, solving problems, training the ability to abstract),
- practice oral communication skills in the exercises by practicing free speech in front of an audience.
None. Basic knowledge in the scope of the module Introduction to Computer Science is recommended. Biological basics will be recapitulated, therefore no previous knowledge is required.
- - J. Xiong. Essential Bioinformatics. Cambridge University Press, 2006.
- - W. W. Cohen. A Computer Scientist’s Guide to Cell Biology. Springer-Verlag, 2007.
- - N. Cristianini, M.W. Hahn. Introduction to Computational Genomics – A case studies approach. Cambridge press, 2007.
- - F. J. Burkowski. Structural Bioinformatics – An algorithmic approach. Chapman & Hall, CRC, 2009..
This page describes a module according to the latest valid module guide in Wintersemester 2022/23. Most rules valid for a module are not covered by the examination regulations and can therefore be updated on a semesterly basis. The following versions are available in the online module guide:
- WiSe 2016/17 (no corresponding element)
- SoSe 2018 (no corresponding element)
- WiSe 2018/19
- WiSe 2019/20
- WiSe 2020/21
- SoSe 2021
- WiSe 2021/22
- WiSe 2022/23
The module guide contains all modules, independent of the current event offer. Please compare the current course catalogue in Marvin.
The information in this online module guide was created automatically. Legally binding is only the information in the examination regulations (Prüfungsordnung). If you notice any discrepancies or errors, we would be grateful for any advice.